Universal Electrochemical Biochip System

Neurotransmitter Diagnostics Platform

Integrating multi-analyte electrochemical sensors (GCE + Chitosan nanocomposite) with ESP32 web monitoring for portable real-time neurotransmitter profiling.

PROJECT COMPLETION 5%
Timeline: 1-2 Months Initial Paid (50% / ₱15,000)

TARGET ANALYTES
Dopamine, Serotonin, Acetylcholine
SENSING BASE
GCE / SPE + Chitosan Matrix
PROJECT BUDGET
₱30,000 Total Limit
CURRENT PHASE STATUS
Procurement & Wiring
ANALYTE
Dopamine
POTENTIAL
0.00 V
CURRENT
0.00 µA
SCAN RATE
50 mV/s
Hardware Mock Active

Electrochemical Signal Output

Simulation Controls

ESP32 Serial Output

9600 baud
[SYS] Biochip Dashboard Initialized.
[SYS] Ready to interface with ESP32 WebSockets/REST API.
[ESP32] Hardware Simulation Mock Loaded.
[LMP91000] Potentiostat front-end configured: Three-Electrode Mode.
[ESP32] Awaiting control signal from dashboard...

Testing Guide & Operational Walkthrough

1
Check Physical Hardware Setup: Verify the ESP32 is powered via micro-USB and connected to the LMP91000 board. Ensure the WE/RE/CE pins are plugged into the Screen-Printed Electrode (SPE).
2
Select Target Profile: Under Simulation Controls, select DA (Dopamine), 5-HT (Serotonin), or ACh (Acetylcholine) to load its potential calibration curve.
3
Run Cyclic Voltammetry (CV): Confirm you are in "CV Loop" view. Click Start CV Scan to trigger a voltage sweep from -0.2V to +0.8V. Observe the redox current profile.
4
Perform Amperometric Spike Test: Switch chart mode to Amperometry. Click Inject Analyte to trigger a raw solution spike and observe the current response step.

Active Chemical Reaction Details

Dopamine (DA) Oxidation Pathway

Target Peak Voltage: +0.22 V vs. Ag/AgCl
Chemical Formula: C8H11NO2 (Dopamine) → C8H9NO2 (Dopaminequinone) + 2H⁺ + 2e⁻

Dopamine undergoes electro-oxidation at the electrode surface, releasing two protons and two electrons. The highly protonated amine groups in the chitosan biopolymer film create electrostatic attractions with the analyte, concentrating it at the electrode interface to yield high peak currents.

Materials & Labor Tracker

Items stay in the same list. Green means delivered, amber means ordered, gray means pending.

Pending / Ordered / Delivered

Check off components as they are procured or set up. The progress percentages and the project overall progress bar adjust dynamically.

Electronics 20%
Electrochem Hardware 0%
Chemicals & Reagents 0%
Safety & PPE 0%
Handling & Storage 0%
Labor & Services 0%
Expense Tracker ₱0
Total Estimated Cost: ₱0
Ordered & Delivered (Spent): ₱0
₱0

1. Electronics

2/10

2. Electrochem Setup

0/6

3. Chemicals & Reagents

0/7

4. Safety & PPE

0/10

5. Handling & Storage

0/8

6. Labor & Services

0/5

System Engineering Documentation

Project details, technical specifications, phases, and developer terms.

Memo Copy

This project focuses on the development of a Multiplex Electrochemical Biochip Platform for Neurotransmitter Detection (Proof-of-Concept). The system integrates a hardware-based electrochemical sensor with a web-based monitoring platform for real-time signal acquisition, visualization, and data logging.

Conventional neurotransmitter analysis is typically performed using laboratory-grade instruments such as HPLC and spectrometry, which are expensive, time-consuming, and not suitable for portable or real-time applications. This project aims to demonstrate a simplified and cost-effective prototype for electrochemical neurotransmitter sensing using modern nanomaterial-enhanced biosensor technology.

The sensing platform is based on a Glassy Carbon Electrode (GCE) modified with nanomaterials such as Graphene Oxide (GO) or Carbon Nanotubes (CNTs) to improve conductivity and signal sensitivity. A chitosan biopolymer interface (95–99% degree of deacetylation) is applied as a biocompatible matrix for immobilization of biorecognition elements such as aptamers or enzymes.

Instead of claiming a single fully selective universal sensor, the system is designed as a multiplex sensing platform, capable of evaluating multiple neurotransmitters (dopamine, serotonin, and acetylcholine) under controlled experimental conditions. Signal separation is achieved through electrode functionalization and electrochemical response profiling.

A. Biochip Sensor System
  • Glassy Carbon Electrode (GCE) based sensor
  • Nanomaterial enhancement (Graphene Oxide / CNTs)
  • Chitosan biocompatible coating
  • Multi-neurotransmitter response capability (single-chip prototype)
B. Neurotransmitter Detection
  • Detection of: Dopamine, Serotonin, Acetylcholine (enzyme-assisted)
  • Electrochemical signal acquisition (current response)
  • Proof-of-concept multi-analyte sensing
C. Data Acquisition & Processing
  • Potentiostat-based signal reading
  • Real-time data capture
  • Signal conversion to readable values
D. Web-Based Monitoring System
  • Live dashboard (graphs & readings)
  • Historical data storage & trends
  • Mobile-friendly responsive UI
  • REST API (hardware → web)

Layer Technology Used Description / Role
Primary Sensor Screen Printed Carbon Electrode (SPE) + Adapter Main working electrode; Chitosan/GO nanocomposite drop-cast onto carbon strip
Backup Sensor Glassy Carbon Electrode (GCE) Optional backup / comparison only — not the primary build target
Analog Front-End LM358 Dual Op-Amp (Primary) Transimpedance amplifier (TIA) circuit for current-to-voltage signal conversion
AFE (Optional) LMP91000 Breakout Module Programmable AFE alternative to LM358 — choose ONE only
Microcontroller ESP32 Development Board Data acquisition via ADC (MCP3008) & WiFi communication
Backend PHP (Native) Server-side rendering, API endpoint, and materials data management
Database JSON Flat-file (materials.json) Stores materials checklist state, procurement status, and expense data
Frontend PHP + Bootstrap 5 + Chart.js Live dashboard, CV/amperometric charts, and materials tracker via browser
Communication REST API (ESP32 → PHP) ESP32 posts sensor readings to web server via HTTP over local WiFi

Phase 1: Prototype Development

Total Cost: ₱30,000 (1 - 2 Months)

  • Single-chip universal biochip prototype setup
  • Basic neurotransmitter detection (dopamine-focused testing)
  • Hardware integration (ESP32 + analog front-end)
  • Web dashboard (real-time monitoring)
  • Data logging system and initial deployment
Payment Terms
  • 50% Initial Payment (₱15,000): Required to start. Covers development, design, and materials procurement. (Non-refundable only upon delivery of progress milestones).
  • 50% Final Balance (₱15,000): Due upon completion of project, prior to final turnover of code, dashboard deployment, and hardware/materials.
  • Cancellation Penalty: 10% cancellation fee based on total project cost (₱3,000) applies if client cancels for any reason.

The physical prototype uses the ESP32 Development Board as the main microcontroller. The primary analog front-end is an LM358 Dual Op-Amp wired as a transimpedance amplifier (TIA), which converts the electrode current response to a readable voltage. An external MCP3008 10-bit ADC chip is used to digitize the TIA output and feed it to the ESP32. The LMP91000 breakout module is available as an optional programmable AFE alternative — choose only one AFE circuit.

Note: The primary working electrode is the Screen Printed Carbon Electrode (SPE) + Adapter. The Glassy Carbon Electrode (GCE) is retained as a backup/comparison electrode only.
Basic Diagram of the Chip
Basic diagram of the chip
ESP32 + LM358 TIA Circuit Wiring Table (Primary)
Component Connection Wire Color Signal Role / Function
ESP32 3V3 LM358 VCC / MCP3008 VDD Red 3.3V Power Supply to AFE and ADC
ESP32 GND LM358 GND / MCP3008 DGND Black Common Ground reference
SPE Working Electrode LM358 Inverting Input (−) White Electrode current fed into TIA input
LM358 Output MCP3008 CH0 (Analog In) Yellow TIA voltage output to ADC channel 0
ESP32 GPIO 18 (CLK) MCP3008 CLK Purple SPI Clock line
ESP32 GPIO 23 (MOSI) MCP3008 DIN Blue SPI Data In (ESP32 → ADC)
ESP32 GPIO 19 (MISO) MCP3008 DOUT Teal SPI Data Out (ADC → ESP32)
ESP32 GPIO 5 (CS) MCP3008 CS/SHDN Grey SPI Chip Select (active low)

Optional (LMP91000 path): If using the LMP91000 breakout module instead, connect via I2C: GPIO 21 (SDA) → SDA, GPIO 22 (SCL) → SCL, GPIO 15 → MENB, GPIO 34 → VOUT. The LMP91000 has a built-in TIA and removes the need for the LM358 discrete circuit.

Electric Circuit Schematic
Electric Circuit Diagram
Physical Prototype Wiring Photo Reference
Placeholder: Physical ESP32 + LMP91000 Wiring Setup Insert photo showing connections between Microcontroller, AFE, and Cell

1. Chitosan Sol-Gel Solution Preparation

A key element of the biochip is the selective sensing membrane. Chitosan polymer is dissolved to create a robust, hydrophilic network supporting neurotransmitter electron transfer:

  1. Weighing: Weigh exactly 100 mg of high-deacetylation chitosan powder (minimum 90% degree of deacetylation).
  2. Acid dissolution: Measure 10 mL of distilled water and add 100 µL of glacial acetic acid to create a 1.0% (v/v) aqueous acetic acid solvent.
  3. Mixing: Slowly disperse the chitosan powder into the acidic solution. Stir continuously at 50°C for 2 to 3 hours until a completely clear, transparent, viscous sol-gel matrix is formed.
  4. pH Adjustment: Adjust the pH of the gel to approximately 4.5 - 5.0 using a dilute sodium hydroxide (NaOH) solution. This maintains polymer stability and supports electrochemical enzyme/mediator activities.
  5. Storage: Store the prepared sol-gel at 4°C. The matrix is stable for up to 3 weeks.
Placeholder: Chitosan Sol-Gel Preparation Setup Insert photo showing acid dissolution, stirring, and pH buffering
2. SPE Surface Modification Protocol (Primary Build)

The primary working electrode is the Screen Printed Carbon Electrode (SPE) with Adapter. Unlike GCE, the SPE does not require mechanical polishing — it is a disposable single-use carbon strip. Modification steps:

  • Step A (Surface Cleaning): Rinse the SPE carbon working area gently with distilled water and air-dry for 5 minutes. Do not mechanically polish — the screen-printed surface is not designed for abrasive treatment.
  • Step B (Nanocomposite dispersion): Mix 1.0 mg/mL of Graphene Oxide (GO) into 1 mL of the chitosan sol-gel. Sonicate for 20 minutes to achieve a uniform carbon nanocomposite suspension. CNTs may be substituted if GO is unavailable.
  • Step C (Drop Casting): Drop-cast exactly 5 µL to 8 µL of the Chitosan/GO nanocomposite gel onto the SPE carbon working electrode area using a micropipette.
  • Step D (Evaporation / Drying): Place the modified SPE under an inverted beaker at room temperature for 12 hours. This forms a thin, ion-conductive, biocompatible sensing interface.

GCE (Backup): If using GCE for comparison, polish with alumina slurry (0.3 µm then 0.05 µm) on microcloth, rinse, sonicate in ethanol 3 min, then distilled water 3 min, and air-dry before drop-casting.

Placeholder: GCE Drop-Casting & Drying Setup Insert photo showing micro-pipetting 5-8 µL sol-gel onto polished tip

1. Cyclic Voltammetry (CV) Sweep

Cyclic Voltammetry is used to identify the characteristic oxidation-reduction (redox) voltage peaks of the target neurotransmitters:

  • Fill the electrochemical cell cup with 10 mL of 0.01M PBS buffer solution (pH 7.4).
  • Immerse the 3 electrodes (GCE modified with Chitosan, Ag/AgCl, and Graphite stick) into the buffer.
  • In the dashboard, trigger a **CV Sweep** from **-0.2V to +0.8V** at a scan rate of 50 mV/s.
  • This initial scan serves as the baseline measurement. The current curve should look smooth without oxidation peaks.
Placeholder: Baseline PBS CV Scan Setup Insert photo of the 3-electrode cell cup immersed in PBS buffer
2. Neurotransmitter Calibration Steps

To measure concentrations and verify sensitivity:

  • Dopamine detection: Inject 100 µL of 1.0 mM Dopamine solution into the PBS cell. Run a CV Sweep. You will observe a distinct oxidation peak around **+0.22 V** representing Dopamine conversion to Dopaminequinone.
  • Serotonin detection: Run a scan in a cell containing Serotonin. You will observe a distinct oxidation peak shifted further anodic around **+0.38 V**.
  • Amperometric read: Under continuous monitoring, hold the potential fixed at **+0.22 V**. When dopamine is added, the current will spike in real-time, showing a proportional relationship with dopamine concentration.
Placeholder: Dopamine Redox Peak Calibration Curves Insert screenshot of plotted cyclic voltammograms showing redox shift

Gabe Mendoza Electrochemical Engineer
Mico Descalso Prototype Designs
John Mergel Materials Logistics
Frouen Medina Networker
Sean Pugosa System Developer

Final optimized materials list for the BioDiagnostics V1.0 PoC. All items verified against official receipt (INV-2024-8842). Prices reflect actual purchase cost.

A. Electronics 26/32 Delivered
ItemPriorityActual CostShopStatus
ESP32 MCU Telemetry Node (WiFi/BT)Critical₱650Local MarketDelivered
MCP3008 10-bit ADC ICCritical₱280relandorIn Process
LM358 Dual Operational Amplifier ICCritical₱90PowerMav ElectronicsDelivered
Alligator Clip Test Lead AssemblyImportant₱120AbeeingDelivered
Precision Film Resistor SetImportant₱150fulabs.phIn Process
Electrolytic Capacitor ArrayImportant₱550VKmallIn Process
Arduino UNO R3 MicrocontrollerCritical₱750Local MarketDelivered
USB Programming CableCritical₱50Local MarketDelivered
Breadboard (830 Tie-Points)Critical₱250Local MarketDelivered
Jumper Wires Assorted (M-M, M-F, F-F)Important₱150Local MarketDelivered
Assorted LEDs (Red, Green, Blue)Important₱50Local MarketDelivered
Tactile Push ButtonsImportant₱40Local MarketDelivered
Rotary Potentiometer (10k)Important₱30Local MarketDelivered
Assorted Diodes (1N4148, 1N4007)Important₱30Local MarketDelivered
Active/Passive Buzzer ModuleImportant₱80Local MarketDelivered
DHT11 Temperature & Humidity SensorOptional₱120Online MarketDelivered
HC-SR04 Ultrasonic Distance SensorOptional₱100Online MarketIn Process
LDR Light Sensor ModuleOptional₱50Online MarketDelivered
PIR Motion SensorOptional₱120Online MarketDelivered
IR Obstacle / Line Tracking SensorOptional₱80Online MarketDelivered
Sound Sensor ModuleOptional₱60Online MarketDelivered
Flame Sensor ModuleOptional₱60Online MarketDelivered
MQ-Series Gas Sensor ModuleOptional₱180Online MarketIn Process
Servo Motor (SG90)Optional₱150Online MarketDelivered
DC Motor with Fan BladeOptional₱100Online MarketDelivered
5V Relay Module (1-Channel)Optional₱80Online MarketDelivered
RGB LED ModuleOptional₱60Online MarketDelivered
LCD Display (16x2) with I2CImportant₱350Online MarketDelivered
7-Segment Display (4-Digit)Optional₱70Online MarketDelivered
9V Battery Clip & HolderImportant₱40Online MarketDelivered
L298N Motor Driver ModuleOptional₱180Online MarketIn Process
Breadboard Power Supply ModuleImportant₱150Online MarketDelivered
B. Electrochem Setup 3/4 Delivered
ItemPriorityActual CostShopStatus
Screen-Printed Carbon Electrode (SPCE) with ConnectorCritical₱1,650fatoni77.phDelivered
Ag/AgCl Reference Electrode (RE)Important₱2,450Scientific SupplierDelivered
Glassy Carbon Working Electrode (GCE)Optional₱1,850Scientific SupplierDelivered
Electrode Interface Clip / Holder SystemCritical₱350Online MarketIn Process

Removed from build: Compact Potentiostat Module (DIY LM358 circuit used instead), 3-Electrode Cell Cup (small container used), Graphite Counter Rod (improvised).

C. Chemicals & Reagents 5/7 Delivered
ItemPriorityActual CostShopStatus
Phosphate-Buffered Saline (PBS) Solution (0.01M, pH 7.4)Critical₱1,150Famei ChemicalDelivered
Potassium Ferricyanide Redox Probe [K3Fe(CN)6]Critical₱1,150Chemical SupplierDelivered
Lab-Grade Distilled Water (dH2O)Critical₱120Local MarketDelivered
Absolute Ethanol (99.9% EtOH)Critical₱350Local PharmacyDelivered
Glacial Acetic Acid (99.85% CH3COOH)Important₱380HOMANKA RAW MATERIALSDelivered
Potassium Chloride (3M KCl) ElectrolyteOptional₱350Chemical SupplierIn Process
Sodium Hydroxide (NaOH) ReagentOptional₱200Chemical SupplierIn Process
D. Safety & PPE 4/4 Delivered
ItemActual CostStatus
Powder-Free Nitrile Examination Gloves₱350Delivered
KN95 Particulate Respirator Masks₱250Delivered
Splash-Resistant Laboratory Face Shield₱150Delivered
Medical-Grade Non-Woven Isolation Gown₱450Delivered

Removed: Safety Goggles (face shield sufficient), ESD Gloves (not critical for this setup).

E. Handling & Storage 3/3 Delivered
ItemActual CostStatus
IP65-Rated Electrical Enclosure Box₱350Delivered
Polypropylene (PP) Laboratory Storage Containers₱274Delivered
Sterile Specimen Containers (60mL)₱150Delivered
F. Labor & Services 1/5 Paid
Service DescriptionCostStatus
Electrochemical Engineering & Setup (EEA)₱3,000Delivered
Hardware Prototyping & CAD Design (PCD)₱3,000Pending
Materials Procurement & Logistics (MPL)₱3,000Pending
IoT Systems & Networking Integration (SNI)₱3,000Pending
Full-Stack Web Development & UI/UX (FWD)₱3,000Pending

System Architecture Note: The system demonstrates a low-cost alternative to conventional potentiostats using discrete components and microcontroller-based processing.